SubtiBank SubtiBank
Version comparison:

2017-06-07 16:27:06Tue Dec 13 2016 11:16:31 GMT+0100 (CET)

proteinLength

333

geneLength

999

Gene

Coordinates

824,714 → 825,715

The protein

Structure

[PDB|4G1U] (from ''Yersinia pestis'', the [[protein|FecD]]-[[protein|FecE]]-[[protein|FecF]] complex, 34% identity) [Pubmed|23142986]

[PDB|4G1U] (from ''Yersinia pestis'', the [SW|YfmD]-[SW|YfmE]-[SW|YfmF] complex, 34% identity) [Pubmed|23142986]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-C330 (yfmD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2328 NBRP B. subtilis, Japan]

aminos

MYHSAKRRSSSRLMMFIIALIIFIFGLGLNLSVGASDISIIDSLKYLFVWDGSKEQLIISTLRLPRTLIGVFVGASLAVAGALMQAMTRNPLASPQIFGVNAGASLFVVASLVILPASPYSSVIFAFAGAAAGGAIVYMIASSGGMTPVKLALSGMAVHLFLSSMTQAIIILNESGEDVLYWMTGAIDGSNWQDVITIAPFSVIGIGLALVFSGSVSVLGLGDETAKGLGQNMNGIRILISLIILILSGASVAVAGPIGFVGLLVPHIVRKLIGEHYQYVLPFSALFGAILLVYADVLARWIAFPYESPVGIVTAIIGTPFFLYLARKGRNLK

[SW|Categories] containing this gene/protein

[SW|ABC transporters], [SW|acquisition of iron], [SW|iron metabolism], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

824,714 -> 825,715

The protein

[SW|Interactions]

[[protein|YfmF]]-([[protein|YfmD]]-[[protein|YfmE]])-([[protein|YfmC]]-[[protein|YhfQ]]) [Pubmed|10092453]

Expression and Regulation

Operon

''[[protein|yfmC]]-[[protein|yfmD]]-[[protein|yfmE]]-[[protein|yfmF]]'' [Pubmed|16672620]

Expression and Regulation

Regulation

induced upon iron starvation ([[protein|Fur]]) [Pubmed|16672620,12354229]

Expression and Regulation

Regulatory mechanism

[[protein|Fur]]: transcription repression [Pubmed|16672620,12354229]